Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
GDF1P27539 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.22■□□□□ 0.03
GDF1P27539 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.22■□□□□ 0.03
GDF1P27539 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GDF1P27539 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.21■□□□□ 0.03
GDF1P27539 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.21■□□□□ 0.03
GDF1P27539 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.21■□□□□ 0.03
GDF1P27539 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GDF1P27539 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.21■□□□□ 0.03
GDF1P27539 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
GDF1P27539 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.21■□□□□ 0.03
GDF1P27539 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.21■□□□□ 0.03
GDF1P27539 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GDF1P27539 RARRES2P8-201ENST00000566335 367 ntBASIC15.21■□□□□ 0.03
GDF1P27539 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GDF1P27539 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GDF1P27539 AC004835.2-201ENST00000603762 682 ntBASIC15.21■□□□□ 0.03
GDF1P27539 AC026120.1-201ENST00000611536 926 ntBASIC15.21■□□□□ 0.03
GDF1P27539 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.21■□□□□ 0.03
GDF1P27539 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDF1P27539 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GDF1P27539 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GDF1P27539 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GDF1P27539 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.21■□□□□ 0.02
GDF1P27539 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
GDF1P27539 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
GDF1P27539 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
GDF1P27539 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.2■□□□□ 0.02
GDF1P27539 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.2■□□□□ 0.02
GDF1P27539 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 AL645608.8-201ENST00000606034 2086 ntBASIC15.2■□□□□ 0.02
GDF1P27539 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
GDF1P27539 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 PMS2P4-201ENST00000412466 1052 ntBASIC15.2■□□□□ 0.02
GDF1P27539 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 RN7SL589P-201ENST00000481268 310 ntBASIC15.2■□□□□ 0.02
GDF1P27539 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.2■□□□□ 0.02
GDF1P27539 AC109635.5-201ENST00000533593 962 ntBASIC15.2■□□□□ 0.02
GDF1P27539 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GDF1P27539 AL135744.1-201ENST00000565098 629 ntBASIC15.2■□□□□ 0.02
GDF1P27539 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.2■□□□□ 0.02
GDF1P27539 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.2■□□□□ 0.02
GDF1P27539 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.2■□□□□ 0.02
GDF1P27539 AC105339.1-204ENST00000636249 355 ntBASIC15.2■□□□□ 0.02
GDF1P27539 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 AC060834.1-201ENST00000443027 2032 ntBASIC15.2■□□□□ 0.02
GDF1P27539 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
GDF1P27539 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.2■□□□□ 0.02
GDF1P27539 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDF1P27539 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GDF1P27539 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.19■□□□□ 0.02
GDF1P27539 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
GDF1P27539 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms