Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB3BP20337 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 AL021920.2-201ENST00000624828 1351 ntBASIC14.78□□□□□ -0.04
RAB3BP20337 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB3BP20337 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB3BP20337 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3BP20337 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 FAM220CP-201ENST00000395253 831 ntBASIC14.78□□□□□ -0.04
RAB3BP20337 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3BP20337 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.78□□□□□ -0.04
RAB3BP20337 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3BP20337 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB3BP20337 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB3BP20337 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.78□□□□□ -0.04
RAB3BP20337 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 AC067930.6-201ENST00000623257 4947 ntBASIC14.78□□□□□ -0.04
RAB3BP20337 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 AL603832.2-201ENST00000566195 2125 ntBASIC14.78□□□□□ -0.04
RAB3BP20337 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB3BP20337 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3BP20337 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
RAB3BP20337 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAB3BP20337 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 AC125634.1-201ENST00000438758 1403 ntBASIC14.77□□□□□ -0.04
RAB3BP20337 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 AC144831.1-201ENST00000573312 2656 ntBASIC14.77□□□□□ -0.04
RAB3BP20337 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 AL365209.1-201ENST00000624418 6473 ntBASIC14.77□□□□□ -0.04
RAB3BP20337 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB3BP20337 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 STARP1-201ENST00000397973 869 ntBASIC14.77□□□□□ -0.05
RAB3BP20337 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAB3BP20337 AC092597.1-201ENST00000487352 616 ntBASIC14.77□□□□□ -0.05
RAB3BP20337 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.77□□□□□ -0.05
RAB3BP20337 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RAB3BP20337 AL390719.2-201ENST00000606993 987 ntBASIC14.77□□□□□ -0.05
RAB3BP20337 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB3BP20337 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RAB3BP20337 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB3BP20337 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB3BP20337 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RAB3BP20337 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
RAB3BP20337 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB3BP20337 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB3BP20337 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3BP20337 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAB3BP20337 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3BP20337 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
RAB3BP20337 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB3BP20337 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3BP20337 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
RAB3BP20337 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3BP20337 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3BP20337 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3BP20337 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3BP20337 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms