Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CYP3A4P08684 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CYP3A4P08684 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.8■□□□□ 0.6
CYP3A4P08684 AC020916.1-201ENST00000587762 1774 ntBASIC18.8■□□□□ 0.6
CYP3A4P08684 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CYP3A4P08684 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CYP3A4P08684 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CYP3A4P08684 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.8■□□□□ 0.6
CYP3A4P08684 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CYP3A4P08684 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CYP3A4P08684 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CYP3A4P08684 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.79■□□□□ 0.6
CYP3A4P08684 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.79■□□□□ 0.6
CYP3A4P08684 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.79■□□□□ 0.6
CYP3A4P08684 AC027307.2-201ENST00000591252 911 ntBASIC18.79■□□□□ 0.6
CYP3A4P08684 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.79■□□□□ 0.6
CYP3A4P08684 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CYP3A4P08684 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.79■□□□□ 0.6
CYP3A4P08684 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.79■□□□□ 0.6
CYP3A4P08684 AD000864.1-201ENST00000624076 2295 ntBASIC18.79■□□□□ 0.6
CYP3A4P08684 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CYP3A4P08684 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CYP3A4P08684 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.78■□□□□ 0.6
CYP3A4P08684 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.78■□□□□ 0.6
CYP3A4P08684 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.78■□□□□ 0.6
CYP3A4P08684 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 AGGF1P2-201ENST00000426656 2106 ntBASIC18.78■□□□□ 0.6
CYP3A4P08684 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.78■□□□□ 0.6
CYP3A4P08684 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.78■□□□□ 0.6
CYP3A4P08684 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.78■□□□□ 0.6
CYP3A4P08684 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.78■□□□□ 0.6
CYP3A4P08684 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
CYP3A4P08684 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYP3A4P08684 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.77■□□□□ 0.6
CYP3A4P08684 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CYP3A4P08684 GGT3P-204ENST00000453783 1664 ntBASIC18.77■□□□□ 0.6
CYP3A4P08684 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CYP3A4P08684 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.77■□□□□ 0.6
CYP3A4P08684 FAM58DP-201ENST00000428076 619 ntBASIC18.77■□□□□ 0.6
CYP3A4P08684 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CYP3A4P08684 AC023141.5-201ENST00000458585 616 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms