Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND1P03886 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.9■□□□□ 0.14
MT-ND1P03886 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 TMPOP1-202ENST00000424642 1267 ntBASIC15.9■□□□□ 0.14
MT-ND1P03886 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 AL136038.3-201ENST00000561909 1096 ntBASIC15.9■□□□□ 0.14
MT-ND1P03886 AC011498.5-201ENST00000592027 486 ntBASIC15.9■□□□□ 0.14
MT-ND1P03886 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 AC125634.1-201ENST00000438758 1403 ntBASIC15.9■□□□□ 0.14
MT-ND1P03886 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND1P03886 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND1P03886 AC092384.3-202ENST00000564646 2873 ntBASIC15.89■□□□□ 0.13
MT-ND1P03886 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND1P03886 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.89■□□□□ 0.13
MT-ND1P03886 IGHV3-41-201ENST00000613121 348 ntBASIC15.89■□□□□ 0.13
MT-ND1P03886 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.89■□□□□ 0.13
MT-ND1P03886 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
MT-ND1P03886 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MT-ND1P03886 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MT-ND1P03886 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND1P03886 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 AC009336.1-201ENST00000608941 1553 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 MTHFR-217ENST00000641820 1569 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MT-ND1P03886 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND1P03886 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.88■□□□□ 0.13
MT-ND1P03886 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.88■□□□□ 0.13
MT-ND1P03886 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 AC122714.2-201ENST00000502787 707 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 KRT8P26-201ENST00000534154 1276 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 AC011840.4-201ENST00000578471 627 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.88■□□□□ 0.13
MT-ND1P03886 AL138831.2-201ENST00000606564 490 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms