Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 UNC93B3-201ENST00000308076 687 ntBASIC13.5□□□□□ -0.25
APOC3P02656 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
APOC3P02656 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 MCCD1P1-208ENST00000445732 328 ntBASIC13.5□□□□□ -0.25
APOC3P02656 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC3P02656 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC3P02656 AC005829.2-201ENST00000571422 1056 ntBASIC13.5□□□□□ -0.25
APOC3P02656 HSD17B1P1-201ENST00000590052 955 ntBASIC13.5□□□□□ -0.25
APOC3P02656 RAP2CP1-201ENST00000605103 478 ntBASIC13.5□□□□□ -0.25
APOC3P02656 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
APOC3P02656 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 AC009299.2-201ENST00000482477 511 ntBASIC13.49□□□□□ -0.25
APOC3P02656 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.49□□□□□ -0.25
APOC3P02656 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.49□□□□□ -0.25
APOC3P02656 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.49□□□□□ -0.25
APOC3P02656 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
APOC3P02656 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
APOC3P02656 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC3P02656 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
APOC3P02656 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOC3P02656 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.48□□□□□ -0.25
APOC3P02656 AL024508.2-201ENST00000607749 1894 ntBASIC13.48□□□□□ -0.25
APOC3P02656 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOC3P02656 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOC3P02656 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
APOC3P02656 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.48□□□□□ -0.25
APOC3P02656 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOC3P02656 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms