Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBC1P01850 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBC1P01850 BX842568.4-201ENST00000421222 227 ntBASIC16.8■□□□□ 0.28
TRBC1P01850 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.8■□□□□ 0.28
TRBC1P01850 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBC1P01850 MIR3909-201ENST00000579518 119 ntBASIC16.8■□□□□ 0.28
TRBC1P01850 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBC1P01850 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBC1P01850 AL031055.1-201ENST00000606362 631 ntBASIC16.8■□□□□ 0.28
TRBC1P01850 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.8■□□□□ 0.28
TRBC1P01850 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBC1P01850 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBC1P01850 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRBC1P01850 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBC1P01850 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 KRT8P39-201ENST00000396270 1433 ntBASIC16.79■□□□□ 0.28
TRBC1P01850 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRBC1P01850 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBC1P01850 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBC1P01850 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
TRBC1P01850 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBC1P01850 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBC1P01850 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBC1P01850 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBC1P01850 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBC1P01850 AP002472.1-201ENST00000577490 586 ntBASIC16.79■□□□□ 0.28
TRBC1P01850 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBC1P01850 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBC1P01850 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBC1P01850 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBC1P01850 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBC1P01850 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 AC009053.2-201ENST00000563701 2365 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 PMS2P4-201ENST00000412466 1052 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 DNAJB3-201ENST00000446806 729 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 HLA-J-202ENST00000469281 1241 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 AC109635.5-201ENST00000533593 962 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBC1P01850 AL009183.1-201ENST00000603760 355 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.78■□□□□ 0.28
TRBC1P01850 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRBC1P01850 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TRBC1P01850 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
TRBC1P01850 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBC1P01850 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBC1P01850 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBC1P01850 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBC1P01850 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRBC1P01850 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRBC1P01850 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBC1P01850 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms