Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TIMP1P01033 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP1P01033 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMP1P01033 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP1P01033 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.92■□□□□ 0.46
TIMP1P01033 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMP1P01033 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMP1P01033 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.92■□□□□ 0.46
TIMP1P01033 AC013467.2-201ENST00000605472 835 ntBASIC17.92■□□□□ 0.46
TIMP1P01033 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TIMP1P01033 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMP1P01033 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMP1P01033 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMP1P01033 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMP1P01033 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 BICD1-207ENST00000551848 1962 ntBASIC17.91■□□□□ 0.46
TIMP1P01033 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TIMP1P01033 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 AC006277.1-201ENST00000624348 1610 ntBASIC17.91■□□□□ 0.46
TIMP1P01033 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 ANKRD19P-201ENST00000338192 862 ntBASIC17.91■□□□□ 0.46
TIMP1P01033 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMP1P01033 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 ACTBP11-201ENST00000436287 1126 ntBASIC17.91■□□□□ 0.46
TIMP1P01033 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.91■□□□□ 0.46
TIMP1P01033 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMP1P01033 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.91■□□□□ 0.46
TIMP1P01033 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TIMP1P01033 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TIMP1P01033 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMP1P01033 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
TIMP1P01033 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 NOC2LP1-202ENST00000452600 2235 ntBASIC17.9■□□□□ 0.46
TIMP1P01033 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.9■□□□□ 0.46
TIMP1P01033 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.9■□□□□ 0.46
TIMP1P01033 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TIMP1P01033 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 AC061975.2-201ENST00000581722 295 ntBASIC17.9■□□□□ 0.46
TIMP1P01033 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 MIR8072-201ENST00000614241 80 ntBASIC17.9■□□□□ 0.46
TIMP1P01033 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TIMP1P01033 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.9■□□□□ 0.46
TIMP1P01033 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
TIMP1P01033 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TIMP1P01033 KRT8P39-201ENST00000396270 1433 ntBASIC17.89■□□□□ 0.46
TIMP1P01033 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TIMP1P01033 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TIMP1P01033 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TIMP1P01033 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TIMP1P01033 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms