Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPBO95292 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 RNPS1P1-201ENST00000507437 918 ntBASIC16.91■□□□□ 0.3
VAPBO95292 OR7E14P-202ENST00000530490 1290 ntBASIC16.91■□□□□ 0.3
VAPBO95292 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.91■□□□□ 0.3
VAPBO95292 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPBO95292 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPBO95292 AC013467.2-201ENST00000605472 835 ntBASIC16.91■□□□□ 0.3
VAPBO95292 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPBO95292 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.91■□□□□ 0.3
VAPBO95292 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.91■□□□□ 0.3
VAPBO95292 AL805961.1-202ENST00000641562 540 ntBASIC16.91■□□□□ 0.3
VAPBO95292 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VAPBO95292 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
VAPBO95292 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 AC006538.1-201ENST00000567905 1585 ntBASIC16.9■□□□□ 0.3
VAPBO95292 ALOX12P2-203ENST00000570921 1945 ntBASIC16.9■□□□□ 0.3
VAPBO95292 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 DUSP5P1-201ENST00000441325 1139 ntBASIC16.9■□□□□ 0.3
VAPBO95292 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.9■□□□□ 0.3
VAPBO95292 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.9■□□□□ 0.3
VAPBO95292 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPBO95292 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.9■□□□□ 0.3
VAPBO95292 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.9■□□□□ 0.3
VAPBO95292 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 TP73-AS1-207ENST00000624167 988 ntBASIC16.9■□□□□ 0.3
VAPBO95292 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPBO95292 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 AC006449.5-201ENST00000610658 2098 ntBASIC16.9■□□□□ 0.3
VAPBO95292 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.9■□□□□ 0.3
VAPBO95292 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VAPBO95292 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPBO95292 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPBO95292 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
VAPBO95292 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VAPBO95292 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.89■□□□□ 0.3
VAPBO95292 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VAPBO95292 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.89■□□□□ 0.29
VAPBO95292 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
VAPBO95292 AC092364.2-201ENST00000596710 2692 ntBASIC16.89■□□□□ 0.29
VAPBO95292 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VAPBO95292 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.89■□□□□ 0.29
VAPBO95292 KRT18P27-201ENST00000427733 1299 ntBASIC16.89■□□□□ 0.29
VAPBO95292 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.89■□□□□ 0.29
VAPBO95292 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 RPS15P9-201ENST00000494093 319 ntBASIC16.89■□□□□ 0.29
VAPBO95292 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.89■□□□□ 0.29
VAPBO95292 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.89■□□□□ 0.29
VAPBO95292 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.89■□□□□ 0.29
VAPBO95292 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms