Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.51■□□□□ 0.71
CTNND1O60716 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.51■□□□□ 0.71
CTNND1O60716 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 AP005018.1-201ENST00000525475 301 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.51■□□□□ 0.71
CTNND1O60716 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.51■□□□□ 0.71
CTNND1O60716 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.51■□□□□ 0.71
CTNND1O60716 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNND1O60716 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 AC022144.1-201ENST00000602255 1580 ntBASIC19.51■□□□□ 0.71
CTNND1O60716 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNND1O60716 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTNND1O60716 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNND1O60716 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNND1O60716 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CTNND1O60716 AL035456.1-201ENST00000456064 1369 ntBASIC19.5■□□□□ 0.71
CTNND1O60716 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNND1O60716 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CTNND1O60716 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.5■□□□□ 0.71
CTNND1O60716 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.5■□□□□ 0.71
CTNND1O60716 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.5■□□□□ 0.71
CTNND1O60716 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNND1O60716 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNND1O60716 AC027307.3-201ENST00000594262 1100 ntBASIC19.5■□□□□ 0.71
CTNND1O60716 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNND1O60716 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.5■□□□□ 0.71
CTNND1O60716 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CTNND1O60716 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CTNND1O60716 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTNND1O60716 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.49■□□□□ 0.71
CTNND1O60716 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.49■□□□□ 0.71
CTNND1O60716 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 FAM220BP-201ENST00000377689 816 ntBASIC19.49■□□□□ 0.71
CTNND1O60716 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.49■□□□□ 0.71
CTNND1O60716 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CTNND1O60716 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.49■□□□□ 0.71
CTNND1O60716 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 SPTSSB-204ENST00000617024 1292 ntBASIC19.49■□□□□ 0.71
CTNND1O60716 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.49■□□□□ 0.71
CTNND1O60716 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.49■□□□□ 0.71
CTNND1O60716 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTNND1O60716 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.49■□□□□ 0.71
CTNND1O60716 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CTNND1O60716 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CTNND1O60716 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.48■□□□□ 0.71
CTNND1O60716 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.48■□□□□ 0.71
CTNND1O60716 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTNND1O60716 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.48■□□□□ 0.71
CTNND1O60716 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTNND1O60716 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.48■□□□□ 0.71
CTNND1O60716 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.48■□□□□ 0.71
CTNND1O60716 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.48■□□□□ 0.71
CTNND1O60716 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTNND1O60716 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms