Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 LINC01711-201ENST00000598340 967 ntBASIC18.84■□□□□ 0.61
ACTN4O43707 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.84■□□□□ 0.61
ACTN4O43707 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 MTHFR-217ENST00000641820 1569 ntBASIC18.84■□□□□ 0.61
ACTN4O43707 PCDHA1-201ENST00000378133 2726 ntBASIC18.84■□□□□ 0.61
ACTN4O43707 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.83■□□□□ 0.61
ACTN4O43707 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.83■□□□□ 0.61
ACTN4O43707 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ACTN4O43707 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ACTN4O43707 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACTN4O43707 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACTN4O43707 AL513523.2-202ENST00000427283 2040 ntBASIC18.83■□□□□ 0.61
ACTN4O43707 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ACTN4O43707 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACTN4O43707 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACTN4O43707 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.83■□□□□ 0.6
ACTN4O43707 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.83■□□□□ 0.6
ACTN4O43707 HNRNPDP1-201ENST00000439535 754 ntBASIC18.83■□□□□ 0.6
ACTN4O43707 DUSP5P1-201ENST00000441325 1139 ntBASIC18.83■□□□□ 0.6
ACTN4O43707 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.83■□□□□ 0.6
ACTN4O43707 KRT18P56-201ENST00000507275 550 ntBASIC18.83■□□□□ 0.6
ACTN4O43707 OR7E14P-202ENST00000530490 1290 ntBASIC18.83■□□□□ 0.6
ACTN4O43707 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.83■□□□□ 0.6
ACTN4O43707 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.83■□□□□ 0.6
ACTN4O43707 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.83■□□□□ 0.6
ACTN4O43707 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.83■□□□□ 0.6
ACTN4O43707 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.83■□□□□ 0.6
ACTN4O43707 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.83■□□□□ 0.6
ACTN4O43707 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ACTN4O43707 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.83■□□□□ 0.6
ACTN4O43707 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACTN4O43707 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.83■□□□□ 0.6
ACTN4O43707 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ACTN4O43707 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ACTN4O43707 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 AC018712.1-201ENST00000455767 687 ntBASIC18.82■□□□□ 0.6
ACTN4O43707 RNPS1P1-201ENST00000507437 918 ntBASIC18.82■□□□□ 0.6
ACTN4O43707 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.82■□□□□ 0.6
ACTN4O43707 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.82■□□□□ 0.6
ACTN4O43707 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.82■□□□□ 0.6
ACTN4O43707 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.82■□□□□ 0.6
ACTN4O43707 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ACTN4O43707 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACTN4O43707 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
ACTN4O43707 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ACTN4O43707 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ACTN4O43707 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ACTN4O43707 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ACTN4O43707 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACTN4O43707 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms