Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.65□□□□□ -0.38
SNAI2O43623 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.65□□□□□ -0.38
SNAI2O43623 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SNAI2O43623 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.65□□□□□ -0.38
SNAI2O43623 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.65□□□□□ -0.38
SNAI2O43623 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.65□□□□□ -0.38
SNAI2O43623 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.65□□□□□ -0.38
SNAI2O43623 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 AL513523.2-202ENST00000427283 2040 ntBASIC12.65□□□□□ -0.38
SNAI2O43623 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SNAI2O43623 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNAI2O43623 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
SNAI2O43623 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SNAI2O43623 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
SNAI2O43623 AC092171.3-201ENST00000610122 2651 ntBASIC12.65□□□□□ -0.39
SNAI2O43623 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SNAI2O43623 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 MMP23A-201ENST00000234610 1017 ntBASIC12.64□□□□□ -0.39
SNAI2O43623 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 FAM8A6P-201ENST00000407496 1135 ntBASIC12.64□□□□□ -0.39
SNAI2O43623 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.64□□□□□ -0.39
SNAI2O43623 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.64□□□□□ -0.39
SNAI2O43623 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.64□□□□□ -0.39
SNAI2O43623 SNORA78-201ENST00000459373 127 ntBASIC12.64□□□□□ -0.39
SNAI2O43623 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 AP003733.1-201ENST00000491725 852 ntBASIC12.64□□□□□ -0.39
SNAI2O43623 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.64□□□□□ -0.39
SNAI2O43623 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.64□□□□□ -0.39
SNAI2O43623 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.64□□□□□ -0.39
SNAI2O43623 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
SNAI2O43623 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SNAI2O43623 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.64□□□□□ -0.39
SNAI2O43623 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.64□□□□□ -0.39
SNAI2O43623 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SNAI2O43623 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SNAI2O43623 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms