Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF13O43567 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RNF13O43567 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF13O43567 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF13O43567 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF13O43567 AC064862.7-201ENST00000604520 867 ntBASIC15.34■□□□□ 0.05
RNF13O43567 AL355877.3-201ENST00000622820 899 ntBASIC15.34■□□□□ 0.05
RNF13O43567 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF13O43567 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.34■□□□□ 0.05
RNF13O43567 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF13O43567 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF13O43567 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RNF13O43567 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RNF13O43567 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF13O43567 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF13O43567 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF13O43567 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF13O43567 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 AC022188.1-201ENST00000620960 1664 ntBASIC15.33■□□□□ 0.04
RNF13O43567 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF13O43567 SCARNA2-201ENST00000458748 420 ntBASIC15.33■□□□□ 0.04
RNF13O43567 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF13O43567 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF13O43567 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF13O43567 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 TUBB8P12-201ENST00000308911 1335 ntBASIC15.33■□□□□ 0.04
RNF13O43567 TUBB7P-202ENST00000428444 1305 ntBASIC15.33■□□□□ 0.04
RNF13O43567 TUBB8P7-204ENST00000567960 1332 ntBASIC15.33■□□□□ 0.04
RNF13O43567 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF13O43567 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF13O43567 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
RNF13O43567 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF13O43567 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
RNF13O43567 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF13O43567 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.32■□□□□ 0.04
RNF13O43567 AL353135.1-201ENST00000606729 504 ntBASIC15.32■□□□□ 0.04
RNF13O43567 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 REXO1L6P-202ENST00000619970 1078 ntBASIC15.32■□□□□ 0.04
RNF13O43567 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF13O43567 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms