Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SEMA3EO15041 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.1■□□□□ 0.81
SEMA3EO15041 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 AC055876.3-201ENST00000431496 288 ntBASIC20.1■□□□□ 0.81
SEMA3EO15041 BCRP1-201ENST00000444246 691 ntBASIC20.1■□□□□ 0.81
SEMA3EO15041 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.1■□□□□ 0.81
SEMA3EO15041 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.1■□□□□ 0.81
SEMA3EO15041 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.1■□□□□ 0.81
SEMA3EO15041 AC138649.4-201ENST00000612222 287 ntBASIC20.1■□□□□ 0.81
SEMA3EO15041 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
SEMA3EO15041 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.1■□□□□ 0.81
SEMA3EO15041 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.1■□□□□ 0.81
SEMA3EO15041 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.1■□□□□ 0.81
SEMA3EO15041 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEMA3EO15041 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SEMA3EO15041 AP3S2-216ENST00000617003 1561 ntBASIC20.09■□□□□ 0.81
SEMA3EO15041 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.09■□□□□ 0.81
SEMA3EO15041 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 RNA5SP421-201ENST00000516864 134 ntBASIC20.09■□□□□ 0.81
SEMA3EO15041 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.09■□□□□ 0.81
SEMA3EO15041 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.09■□□□□ 0.81
SEMA3EO15041 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 AL512652.2-201ENST00000625156 1716 ntBASIC20.09■□□□□ 0.81
SEMA3EO15041 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.09■□□□□ 0.81
SEMA3EO15041 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.09■□□□□ 0.81
SEMA3EO15041 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEMA3EO15041 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SEMA3EO15041 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA3EO15041 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA3EO15041 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA3EO15041 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.08■□□□□ 0.81
SEMA3EO15041 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA3EO15041 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA3EO15041 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 FAM220BP-201ENST00000377689 816 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 HLA-H-201ENST00000383620 1096 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 MIR943-201ENST00000401286 94 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.08■□□□□ 0.81
SEMA3EO15041 FAM8A3P-201ENST00000427218 844 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.08■□□□□ 0.81
SEMA3EO15041 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEMA3EO15041 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.08■□□□□ 0.81
SEMA3EO15041 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 AL158211.3-201ENST00000607385 239 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.08■□□□□ 0.81
SEMA3EO15041 AC020765.3-201ENST00000613051 740 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 AC018529.1-201ENST00000613063 361 ntBASIC20.08■□□□□ 0.81
SEMA3EO15041 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SEMA3EO15041 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA3EO15041 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA3EO15041 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.08■□□□□ 0.8
SEMA3EO15041 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA3EO15041 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA3EO15041 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA3EO15041 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEMA3EO15041 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.07■□□□□ 0.8
SEMA3EO15041 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SEMA3EO15041 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms