Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 COX5BP2-201ENST00000392354 334 ntBASIC13.96□□□□□ -0.17
AP4M1O00189 AC103564.2-201ENST00000432853 1299 ntBASIC13.96□□□□□ -0.17
AP4M1O00189 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.96□□□□□ -0.17
AP4M1O00189 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.96□□□□□ -0.17
AP4M1O00189 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
AP4M1O00189 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
AP4M1O00189 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AP4M1O00189 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4M1O00189 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4M1O00189 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.96□□□□□ -0.18
AP4M1O00189 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4M1O00189 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.96□□□□□ -0.18
AP4M1O00189 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.96□□□□□ -0.18
AP4M1O00189 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4M1O00189 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.96□□□□□ -0.18
AP4M1O00189 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4M1O00189 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP4M1O00189 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AP4M1O00189 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AP4M1O00189 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.95□□□□□ -0.18
AP4M1O00189 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 CYP2T1P-202ENST00000641596 2535 ntBASIC13.95□□□□□ -0.18
AP4M1O00189 AC009949.1-201ENST00000623048 1830 ntBASIC13.95□□□□□ -0.18
AP4M1O00189 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AP4M1O00189 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4M1O00189 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4M1O00189 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4M1O00189 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.95□□□□□ -0.18
AP4M1O00189 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
AP4M1O00189 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4M1O00189 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.95□□□□□ -0.18
AP4M1O00189 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.95□□□□□ -0.18
AP4M1O00189 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP4M1O00189 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.95□□□□□ -0.18
AP4M1O00189 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 AC010460.3-201ENST00000511359 1579 ntBASIC13.95□□□□□ -0.18
AP4M1O00189 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.95□□□□□ -0.18
AP4M1O00189 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP4M1O00189 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms