Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 NKILA-202ENST00000614771 2598 ntBASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YJEFN3A6XGL0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AC020916.1-201ENST00000587762 1774 ntBASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AC006538.1-201ENST00000567905 1585 ntBASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AL355306.1-201ENST00000415580 579 ntBASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 ADH5P3-201ENST00000433842 1137 ntBASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YJEFN3A6XGL0 HLA-A-202ENST00000376806 1854 ntBASIC17.46■□□□□ 0.38
YJEFN3A6XGL0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AC211486.1-202ENST00000416371 468 ntBASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 ACTG1P14-201ENST00000446382 1122 ntBASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AC211476.1-201ENST00000503899 468 ntBASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AC021097.1-201ENST00000607902 574 ntBASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AC134684.3-201ENST00000641758 218 ntBASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YJEFN3A6XGL0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms