Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 EGFEM1P-202ENST00000431685 1563 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 MINOS1P3-201ENST00000457048 203 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 TOB2P1-201ENST00000469761 992 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC096582.2-201ENST00000510860 516 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 TPSP2-201ENST00000561760 610 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 AP002414.4-201ENST00000589764 1148 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 AL590326.2-201ENST00000625139 305 ntBASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF103-CHMP3A0A140T963 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF103-CHMP3A0A140T963 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 IER3-202ENST00000376377 1350 ntBASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 DRAXINP1-201ENST00000437611 948 ntBASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 LINC00265-3P-201ENST00000447588 903 ntBASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 AL135999.2-201ENST00000622438 1686 ntBASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 AC132938.5-201ENST00000624980 1813 ntBASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF103-CHMP3A0A140T963 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF103-CHMP3A0A140T963 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms