Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 FAM220CP-201ENST00000395253 831 ntBASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 COX11P1-201ENST00000489116 835 ntBASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV18A0A075B6X5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 AC144831.1-201ENST00000573312 2656 ntBASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 AC104640.1-201ENST00000562617 2109 ntBASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 SLC25A3P1-201ENST00000443844 931 ntBASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 Z83836.1-201ENST00000624605 1642 ntBASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 AL596087.1-201ENST00000400979 1969 ntBASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 AL353593.2-201ENST00000602529 1483 ntBASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV18A0A075B6X5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms