Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AC011298.2-201ENST00000617989 482 ntBASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AC097493.4-201ENST00000641197 219 ntBASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 KRT18P23-201ENST00000435622 1283 ntBASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 FAM207BP-201ENST00000447172 505 ntBASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 NAPSB-206ENST00000562112 1266 ntBASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 C2orf69P3-201ENST00000565542 1120 ntBASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 AP000692.2-201ENST00000608391 879 ntBASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
LRCH1Q9Y2L9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 AC097488.1-201ENST00000507834 756 ntBASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 MIR3180-4-201ENST00000582223 153 ntBASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 AC130371.2-201ENST00000619443 611 ntBASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms