Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 SERBP1P5-201ENST00000510079 1181 ntBASIC17.79■□□□□ 0.44
CDH22Q9UJ99 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH22Q9UJ99 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH22Q9UJ99 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 FAM207CP-201ENST00000443486 507 ntBASIC17.77■□□□□ 0.44
CDH22Q9UJ99 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 AL009183.1-201ENST00000603760 355 ntBASIC17.77■□□□□ 0.44
CDH22Q9UJ99 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 AL008721.1-201ENST00000609964 604 ntBASIC17.77■□□□□ 0.44
CDH22Q9UJ99 AL139327.4-201ENST00000612362 153 ntBASIC17.77■□□□□ 0.44
CDH22Q9UJ99 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH22Q9UJ99 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH22Q9UJ99 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms