Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIN7CQ9NUP9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 AL391005.1-201ENST00000623953 2435 ntBASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LIN7CQ9NUP9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 AL691432.3-201ENST00000621860 400 ntBASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIN7CQ9NUP9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AC046158.3-201ENST00000624947 2558 ntBASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AC079328.2-201ENST00000561241 3354 ntBASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AL450487.1-201ENST00000426799 995 ntBASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIN7CQ9NUP9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms