Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 AC006504.4-201ENST00000592118 1568 ntBASIC17.74■□□□□ 0.43
CD248Q9HCU0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 AC064836.3-201ENST00000607928 673 ntBASIC17.74■□□□□ 0.43
CD248Q9HCU0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
CD248Q9HCU0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD248Q9HCU0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 AC100803.2-201ENST00000562459 1963 ntBASIC17.73■□□□□ 0.43
CD248Q9HCU0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 AP001160.2-201ENST00000596071 487 ntBASIC17.73■□□□□ 0.43
CD248Q9HCU0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CD248Q9HCU0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.72■□□□□ 0.43
CD248Q9HCU0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms