Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 AL391256.1-201ENST00000443260 1855 ntBASIC18.07■□□□□ 0.48
NXF3Q9H4D5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NXF3Q9H4D5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 MIR346-201ENST00000362234 95 ntBASIC18.06■□□□□ 0.48
NXF3Q9H4D5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 MIR770-201ENST00000390219 98 ntBASIC18.06■□□□□ 0.48
NXF3Q9H4D5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 AL512356.2-201ENST00000546955 174 ntBASIC18.06■□□□□ 0.48
NXF3Q9H4D5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 AC015911.4-201ENST00000588022 1070 ntBASIC18.06■□□□□ 0.48
NXF3Q9H4D5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.06■□□□□ 0.48
NXF3Q9H4D5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CNN2P2-201ENST00000443536 909 ntBASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CNN2P3-201ENST00000450201 906 ntBASIC18.05■□□□□ 0.48
NXF3Q9H4D5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 KRT18P34-201ENST00000488218 1270 ntBASIC18.05■□□□□ 0.48
NXF3Q9H4D5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AL136317.3-201ENST00000618497 906 ntBASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 AC012313.1-201ENST00000593393 3059 ntBASIC18.05■□□□□ 0.48
NXF3Q9H4D5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.05■□□□□ 0.48
NXF3Q9H4D5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms