Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.24■□□□□ 0.67
ARID3AQ99856 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.24■□□□□ 0.67
ARID3AQ99856 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.24■□□□□ 0.67
ARID3AQ99856 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.24■□□□□ 0.67
ARID3AQ99856 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.24■□□□□ 0.67
ARID3AQ99856 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.24■□□□□ 0.67
ARID3AQ99856 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.24■□□□□ 0.67
ARID3AQ99856 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARID3AQ99856 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.24■□□□□ 0.67
ARID3AQ99856 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.23■□□□□ 0.67
ARID3AQ99856 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.23■□□□□ 0.67
ARID3AQ99856 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 AC016734.2-201ENST00000624325 1377 ntBASIC19.23■□□□□ 0.67
ARID3AQ99856 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.23■□□□□ 0.67
ARID3AQ99856 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.23■□□□□ 0.67
ARID3AQ99856 AC068472.1-201ENST00000474589 881 ntBASIC19.23■□□□□ 0.67
ARID3AQ99856 KRT8P26-201ENST00000534154 1276 ntBASIC19.23■□□□□ 0.67
ARID3AQ99856 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.23■□□□□ 0.67
ARID3AQ99856 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ARID3AQ99856 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ARID3AQ99856 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ARID3AQ99856 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.23■□□□□ 0.67
ARID3AQ99856 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.23■□□□□ 0.67
ARID3AQ99856 PTENP1-202ENST00000532280 3996 ntBASIC19.23■□□□□ 0.67
ARID3AQ99856 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARID3AQ99856 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ARID3AQ99856 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ARID3AQ99856 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 AL845331.1-201ENST00000424978 1190 ntBASIC19.22■□□□□ 0.67
ARID3AQ99856 AC112698.1-201ENST00000510299 916 ntBASIC19.22■□□□□ 0.67
ARID3AQ99856 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.22■□□□□ 0.67
ARID3AQ99856 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.22■□□□□ 0.67
ARID3AQ99856 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.22■□□□□ 0.67
ARID3AQ99856 AL592071.1-201ENST00000611956 408 ntBASIC19.22■□□□□ 0.67
ARID3AQ99856 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ARID3AQ99856 AP000550.4-202ENST00000639755 178 ntBASIC19.22■□□□□ 0.67
ARID3AQ99856 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ARID3AQ99856 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.22■□□□□ 0.67
ARID3AQ99856 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.22■□□□□ 0.67
ARID3AQ99856 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ARID3AQ99856 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 AL355312.1-201ENST00000407115 2176 ntBASIC19.22■□□□□ 0.67
ARID3AQ99856 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARID3AQ99856 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ARID3AQ99856 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
ARID3AQ99856 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms