Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 AC104581.1-202ENST00000635932 2618 ntBASIC17.3■□□□□ 0.36
CDCA3Q99618 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA3Q99618 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCA3Q99618 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCA3Q99618 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDCA3Q99618 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA3Q99618 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CDCA3Q99618 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDCA3Q99618 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
CDCA3Q99618 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CDCA3Q99618 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDCA3Q99618 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDCA3Q99618 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.29■□□□□ 0.36
CDCA3Q99618 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.29■□□□□ 0.36
CDCA3Q99618 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CDCA3Q99618 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA3Q99618 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCA3Q99618 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.29■□□□□ 0.36
CDCA3Q99618 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.28■□□□□ 0.36
CDCA3Q99618 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.28■□□□□ 0.36
CDCA3Q99618 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.28■□□□□ 0.36
CDCA3Q99618 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.28■□□□□ 0.36
CDCA3Q99618 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 MYCLP2-201ENST00000449268 967 ntBASIC17.28■□□□□ 0.36
CDCA3Q99618 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 SPDYE18-201ENST00000510091 1050 ntBASIC17.28■□□□□ 0.36
CDCA3Q99618 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.28■□□□□ 0.36
CDCA3Q99618 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.28■□□□□ 0.36
CDCA3Q99618 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDCA3Q99618 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDCA3Q99618 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.28■□□□□ 0.36
CDCA3Q99618 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CDCA3Q99618 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.27■□□□□ 0.36
CDCA3Q99618 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.27■□□□□ 0.36
CDCA3Q99618 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.27■□□□□ 0.36
CDCA3Q99618 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.27■□□□□ 0.36
CDCA3Q99618 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
CDCA3Q99618 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDCA3Q99618 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms