Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.82■□□□□ 0.44
CALR3Q96L12 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.82■□□□□ 0.44
CALR3Q96L12 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.82■□□□□ 0.44
CALR3Q96L12 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.82■□□□□ 0.44
CALR3Q96L12 AL591684.3-201ENST00000605187 298 ntBASIC17.82■□□□□ 0.44
CALR3Q96L12 AL589182.2-201ENST00000619332 1049 ntBASIC17.82■□□□□ 0.44
CALR3Q96L12 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 AP000550.4-202ENST00000639755 178 ntBASIC17.82■□□□□ 0.44
CALR3Q96L12 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CALR3Q96L12 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CALR3Q96L12 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CALR3Q96L12 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CALR3Q96L12 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 ALOX12P2-203ENST00000570921 1945 ntBASIC17.81■□□□□ 0.44
CALR3Q96L12 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 AC106795.1-205ENST00000512851 1056 ntBASIC17.81■□□□□ 0.44
CALR3Q96L12 AP000867.3-201ENST00000524675 377 ntBASIC17.81■□□□□ 0.44
CALR3Q96L12 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 AL139288.1-201ENST00000623748 933 ntBASIC17.81■□□□□ 0.44
CALR3Q96L12 AF228730.7-201ENST00000641842 219 ntBASIC17.81■□□□□ 0.44
CALR3Q96L12 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.81■□□□□ 0.44
CALR3Q96L12 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.81■□□□□ 0.44
CALR3Q96L12 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CALR3Q96L12 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CALR3Q96L12 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CALR3Q96L12 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CALR3Q96L12 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 AC105917.1-201ENST00000506637 2539 ntBASIC17.8■□□□□ 0.44
CALR3Q96L12 GGT3P-204ENST00000453783 1664 ntBASIC17.8■□□□□ 0.44
CALR3Q96L12 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CALR3Q96L12 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
CALR3Q96L12 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 AC079328.2-201ENST00000561241 3354 ntBASIC17.8■□□□□ 0.44
CALR3Q96L12 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 RBM17P3-201ENST00000417687 1192 ntBASIC17.8■□□□□ 0.44
CALR3Q96L12 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.8■□□□□ 0.44
CALR3Q96L12 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.8■□□□□ 0.44
CALR3Q96L12 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.8■□□□□ 0.44
CALR3Q96L12 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 AC099336.1-202ENST00000602961 463 ntBASIC17.8■□□□□ 0.44
CALR3Q96L12 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.8■□□□□ 0.44
CALR3Q96L12 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CALR3Q96L12 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CALR3Q96L12 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms