Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 TSPY12P-201ENST00000421279 868 ntBASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 AL137013.1-201ENST00000432946 1228 ntBASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 AC005363.2-201ENST00000618631 242 ntBASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 AL157888.1-201ENST00000631930 593 ntBASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP6Q96FZ7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 AC034232.1-201ENST00000506026 1064 ntBASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP6Q96FZ7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms