Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 AC008667.4-201ENST00000607370 168 ntBASIC19.99■□□□□ 0.79
DDX11Q96FC9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX11Q96FC9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX11Q96FC9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX11Q96FC9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX11Q96FC9 PCDHB17P-201ENST00000539533 2393 ntBASIC19.99■□□□□ 0.79
DDX11Q96FC9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 AC211486.1-202ENST00000416371 468 ntBASIC19.98■□□□□ 0.79
DDX11Q96FC9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 AC211476.1-201ENST00000503899 468 ntBASIC19.98■□□□□ 0.79
DDX11Q96FC9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 AC004790.2-201ENST00000623588 572 ntBASIC19.98■□□□□ 0.79
DDX11Q96FC9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
DDX11Q96FC9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX11Q96FC9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 AL118508.1-201ENST00000613502 2345 ntBASIC19.97■□□□□ 0.79
DDX11Q96FC9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 MCCD1P2-201ENST00000423228 335 ntBASIC19.97■□□□□ 0.79
DDX11Q96FC9 ACTG1P4-201ENST00000425123 1122 ntBASIC19.97■□□□□ 0.79
DDX11Q96FC9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
DDX11Q96FC9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX11Q96FC9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 AC002310.6-201ENST00000624451 1377 ntBASIC19.96■□□□□ 0.79
DDX11Q96FC9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PRSS29P-201ENST00000440800 595 ntBASIC19.96■□□□□ 0.79
DDX11Q96FC9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 AC018845.2-201ENST00000568326 409 ntBASIC19.96■□□□□ 0.79
DDX11Q96FC9 AC005829.1-201ENST00000570002 483 ntBASIC19.96■□□□□ 0.79
DDX11Q96FC9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms