Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 AC097374.2-201ENST00000618617 1306 ntBASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RAB40AQ8WXH6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 NUS1P2-201ENST00000417358 873 ntBASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 TSPY26P-202ENST00000565928 3884 ntBASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40AQ8WXH6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 AC006538.1-201ENST00000567905 1585 ntBASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40AQ8WXH6 AC132872.4-202ENST00000622924 2756 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms