Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AC097376.2-205ENST00000610159 5334 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 OR2I1P-209ENST00000641730 5365 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 PCDHA3-202ENST00000532566 4594 ntBASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 BX088651.1-201ENST00000540551 451 ntBASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 CD177P1-201ENST00000606252 935 ntBASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
SMIM11BQ8TCY0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM11BQ8TCY0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms