Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 HCG4-201ENST00000418983 998 ntBASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 AC009947.1-201ENST00000444350 727 ntBASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 AC087641.1-201ENST00000557561 1021 ntBASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM35BQ8NCS4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 FAM185BP-201ENST00000443595 716 ntBASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 CYP2A7P1-201ENST00000595391 815 ntBASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM35BQ8NCS4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 SNX33P1-201ENST00000592116 1762 ntBASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 VN2R19P-201ENST00000442399 1052 ntBASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 AL121894.2-201ENST00000602977 491 ntBASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 KRT8P39-201ENST00000396270 1433 ntBASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM35BQ8NCS4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM35BQ8NCS4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM35BQ8NCS4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM35BQ8NCS4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEM35BQ8NCS4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEM35BQ8NCS4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
TMEM35BQ8NCS4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms