Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 AC104109.2-201ENST00000602919 1418 ntBASIC17.34■□□□□ 0.37
PAF1Q8N7H5 BX640515.1-201ENST00000617215 977 ntBASIC17.34■□□□□ 0.37
PAF1Q8N7H5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PAF1Q8N7H5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PAF1Q8N7H5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 RNA5SP419-201ENST00000515908 135 ntBASIC17.33■□□□□ 0.36
PAF1Q8N7H5 RNA5SP415-201ENST00000517246 115 ntBASIC17.33■□□□□ 0.36
PAF1Q8N7H5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 AC139713.2-201ENST00000641328 2723 ntBASIC17.33■□□□□ 0.36
PAF1Q8N7H5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PAF1Q8N7H5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 KRT18P27-201ENST00000427733 1299 ntBASIC17.32■□□□□ 0.36
PAF1Q8N7H5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 GGTLC5P-201ENST00000617623 998 ntBASIC17.32■□□□□ 0.36
PAF1Q8N7H5 AL805961.1-202ENST00000641562 540 ntBASIC17.32■□□□□ 0.36
PAF1Q8N7H5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
PAF1Q8N7H5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 AL590787.1-201ENST00000568856 1315 ntBASIC17.31■□□□□ 0.36
PAF1Q8N7H5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 AP002414.1-201ENST00000391405 1147 ntBASIC17.31■□□□□ 0.36
PAF1Q8N7H5 AC073621.1-201ENST00000392730 636 ntBASIC17.31■□□□□ 0.36
PAF1Q8N7H5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PAF1Q8N7H5 UNC93B6-202ENST00000528242 690 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms