Protein–RNA interactions for Protein: Q8IWD4

CCDC117, Coiled-coil domain-containing protein 117, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117Q8IWD4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 AC006538.3-201ENST00000612495 578 ntBASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 AC022211.2-201ENST00000585075 2527 ntBASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC117Q8IWD4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 FZD10-202ENST00000539839 3282 ntBASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 MCCD1P2-201ENST00000423228 335 ntBASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 KRT19P2-202ENST00000557173 1012 ntBASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 AC005412.3-201ENST00000580309 715 ntBASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 AC079781.4-201ENST00000641908 219 ntBASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 AC025580.3-201ENST00000617932 1424 ntBASIC17.46■□□□□ 0.39
CCDC117Q8IWD4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CCDC117Q8IWD4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC117Q8IWD4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC117Q8IWD4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 AC009053.2-201ENST00000563701 2365 ntBASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 AC074386.1-202ENST00000463561 864 ntBASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 PDPK2P-202ENST00000562415 1191 ntBASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC117Q8IWD4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 AC060834.1-201ENST00000443027 2032 ntBASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC117Q8IWD4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms