Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 GGT4P-201ENST00000623672 1708 ntBASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 FAM185BP-201ENST00000443595 716 ntBASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 FDX1P1-201ENST00000449115 551 ntBASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 KRT8P39-201ENST00000396270 1433 ntBASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF9Q5VWM5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 AC018695.7-201ENST00000624587 2492 ntBASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 AL031731.1-201ENST00000642131 2094 ntBASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 AL662844.1-201ENST00000546340 181 ntBASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 AC010654.1-201ENST00000615722 808 ntBASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF9Q5VWM5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 GGT3P-204ENST00000453783 1664 ntBASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 ME2P1-201ENST00000426028 1970 ntBASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 PRSS29P-201ENST00000440800 595 ntBASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 AC005412.3-201ENST00000580309 715 ntBASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF9Q5VWM5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms