Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.25■□□□□ 0.67
USH1GQ495M9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.25■□□□□ 0.67
USH1GQ495M9 SPCS2P4-201ENST00000436160 681 ntBASIC19.25■□□□□ 0.67
USH1GQ495M9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.25■□□□□ 0.67
USH1GQ495M9 AC109322.1-201ENST00000524499 1264 ntBASIC19.25■□□□□ 0.67
USH1GQ495M9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.25■□□□□ 0.67
USH1GQ495M9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.25■□□□□ 0.67
USH1GQ495M9 AC004449.1-201ENST00000564240 433 ntBASIC19.25■□□□□ 0.67
USH1GQ495M9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.25■□□□□ 0.67
USH1GQ495M9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 AL355385.1-201ENST00000606123 409 ntBASIC19.25■□□□□ 0.67
USH1GQ495M9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USH1GQ495M9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
USH1GQ495M9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 WASH6P-202ENST00000359512 1437 ntBASIC19.25■□□□□ 0.67
USH1GQ495M9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.25■□□□□ 0.67
USH1GQ495M9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.25■□□□□ 0.67
USH1GQ495M9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USH1GQ495M9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USH1GQ495M9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.24■□□□□ 0.67
USH1GQ495M9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USH1GQ495M9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USH1GQ495M9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.24■□□□□ 0.67
USH1GQ495M9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.24■□□□□ 0.67
USH1GQ495M9 AC069335.1-201ENST00000489972 472 ntBASIC19.24■□□□□ 0.67
USH1GQ495M9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.24■□□□□ 0.67
USH1GQ495M9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.24■□□□□ 0.67
USH1GQ495M9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 AP001094.4-201ENST00000579008 2176 ntBASIC19.24■□□□□ 0.67
USH1GQ495M9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.24■□□□□ 0.67
USH1GQ495M9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USH1GQ495M9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
USH1GQ495M9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USH1GQ495M9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.23■□□□□ 0.67
USH1GQ495M9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.23■□□□□ 0.67
USH1GQ495M9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.23■□□□□ 0.67
USH1GQ495M9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 AC006277.1-201ENST00000624348 1610 ntBASIC19.23■□□□□ 0.67
USH1GQ495M9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.23■□□□□ 0.67
USH1GQ495M9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.23■□□□□ 0.67
USH1GQ495M9 RFPL4AP1-201ENST00000530883 850 ntBASIC19.23■□□□□ 0.67
USH1GQ495M9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.23■□□□□ 0.67
USH1GQ495M9 MIR3909-201ENST00000579518 119 ntBASIC19.23■□□□□ 0.67
USH1GQ495M9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
USH1GQ495M9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.23■□□□□ 0.67
USH1GQ495M9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USH1GQ495M9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
USH1GQ495M9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
USH1GQ495M9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
USH1GQ495M9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USH1GQ495M9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms