Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP1Q04837 AL390719.2-201ENST00000606993 987 ntBASIC14.27□□□□□ -0.13
SSBP1Q04837 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.27□□□□□ -0.13
SSBP1Q04837 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.27□□□□□ -0.13
SSBP1Q04837 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SSBP1Q04837 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SSBP1Q04837 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP1Q04837 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
SSBP1Q04837 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.26□□□□□ -0.13
SSBP1Q04837 AC068587.6-202ENST00000641839 5619 ntBASIC14.26□□□□□ -0.13
SSBP1Q04837 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SSBP1Q04837 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.26□□□□□ -0.13
SSBP1Q04837 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 STARP1-201ENST00000397973 869 ntBASIC14.26□□□□□ -0.13
SSBP1Q04837 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.26□□□□□ -0.13
SSBP1Q04837 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.26□□□□□ -0.13
SSBP1Q04837 POU5F1P6-201ENST00000466990 990 ntBASIC14.26□□□□□ -0.13
SSBP1Q04837 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP1Q04837 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP1Q04837 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.26□□□□□ -0.13
SSBP1Q04837 AL138831.2-201ENST00000606564 490 ntBASIC14.26□□□□□ -0.13
SSBP1Q04837 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SSBP1Q04837 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSBP1Q04837 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 CYP2D8P-201ENST00000433633 1490 ntBASIC14.25□□□□□ -0.13
SSBP1Q04837 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 AC068418.2-201ENST00000577309 3703 ntBASIC14.25□□□□□ -0.13
SSBP1Q04837 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.25□□□□□ -0.13
SSBP1Q04837 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.25□□□□□ -0.13
SSBP1Q04837 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP1Q04837 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP1Q04837 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP1Q04837 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms