Protein–RNA interactions for Protein: Q02818

NUCB1, Nucleobindin-1, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1Q02818 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
NUCB1Q02818 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.7■□□□□ 0.9
NUCB1Q02818 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.7■□□□□ 0.9
NUCB1Q02818 GPAA1P2-202ENST00000606848 1787 ntBASIC20.7■□□□□ 0.9
NUCB1Q02818 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.7■□□□□ 0.9
NUCB1Q02818 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.7■□□□□ 0.9
NUCB1Q02818 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.7■□□□□ 0.9
NUCB1Q02818 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
NUCB1Q02818 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.7■□□□□ 0.9
NUCB1Q02818 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.7■□□□□ 0.9
NUCB1Q02818 FAM215A-202ENST00000632077 792 ntBASIC20.7■□□□□ 0.9
NUCB1Q02818 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.7■□□□□ 0.9
NUCB1Q02818 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.7■□□□□ 0.9
NUCB1Q02818 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.7■□□□□ 0.9
NUCB1Q02818 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NUCB1Q02818 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
NUCB1Q02818 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUCB1Q02818 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.69■□□□□ 0.9
NUCB1Q02818 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.69■□□□□ 0.9
NUCB1Q02818 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NUCB1Q02818 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 AF186996.4-201ENST00000467186 377 ntBASIC20.69■□□□□ 0.9
NUCB1Q02818 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.69■□□□□ 0.9
NUCB1Q02818 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.69■□□□□ 0.9
NUCB1Q02818 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.69■□□□□ 0.9
NUCB1Q02818 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 MIR1199-201ENST00000621445 119 ntBASIC20.69■□□□□ 0.9
NUCB1Q02818 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.69■□□□□ 0.9
NUCB1Q02818 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.69■□□□□ 0.9
NUCB1Q02818 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUCB1Q02818 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.68■□□□□ 0.9
NUCB1Q02818 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.68■□□□□ 0.9
NUCB1Q02818 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.68■□□□□ 0.9
NUCB1Q02818 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
NUCB1Q02818 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NUCB1Q02818 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.68■□□□□ 0.9
NUCB1Q02818 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.68■□□□□ 0.9
NUCB1Q02818 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NUCB1Q02818 HCG4-201ENST00000418983 998 ntBASIC20.68■□□□□ 0.9
NUCB1Q02818 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.68■□□□□ 0.9
NUCB1Q02818 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.68■□□□□ 0.9
NUCB1Q02818 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.68■□□□□ 0.9
NUCB1Q02818 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 AC108073.2-201ENST00000464002 357 ntBASIC20.68■□□□□ 0.9
NUCB1Q02818 AC104692.2-201ENST00000603054 253 ntBASIC20.68■□□□□ 0.9
NUCB1Q02818 AC004790.2-201ENST00000623588 572 ntBASIC20.68■□□□□ 0.9
NUCB1Q02818 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NUCB1Q02818 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NUCB1Q02818 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.68■□□□□ 0.9
NUCB1Q02818 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCB1Q02818 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUCB1Q02818 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUCB1Q02818 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
NUCB1Q02818 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCB1Q02818 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCB1Q02818 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms