Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
EPHB3P54753 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
EPHB3P54753 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB3P54753 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB3P54753 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB3P54753 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
EPHB3P54753 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
EPHB3P54753 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
EPHB3P54753 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB3P54753 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB3P54753 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB3P54753 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB3P54753 INGX-202ENST00000489074 768 ntBASIC17.49■□□□□ 0.39
EPHB3P54753 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.49■□□□□ 0.39
EPHB3P54753 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB3P54753 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB3P54753 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB3P54753 AJ011932.1-201ENST00000621707 465 ntBASIC17.49■□□□□ 0.39
EPHB3P54753 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
EPHB3P54753 AC006277.1-201ENST00000624348 1610 ntBASIC17.49■□□□□ 0.39
EPHB3P54753 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB3P54753 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.48■□□□□ 0.39
EPHB3P54753 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHB3P54753 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHB3P54753 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
EPHB3P54753 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHB3P54753 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHB3P54753 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.48■□□□□ 0.39
EPHB3P54753 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.48■□□□□ 0.39
EPHB3P54753 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHB3P54753 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.48■□□□□ 0.39
EPHB3P54753 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHB3P54753 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 AC013467.2-201ENST00000605472 835 ntBASIC17.48■□□□□ 0.39
EPHB3P54753 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.48■□□□□ 0.39
EPHB3P54753 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EPHB3P54753 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
EPHB3P54753 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.48■□□□□ 0.39
EPHB3P54753 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB3P54753 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EPHB3P54753 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHB3P54753 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHB3P54753 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHB3P54753 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.47■□□□□ 0.39
EPHB3P54753 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
EPHB3P54753 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.47■□□□□ 0.39
EPHB3P54753 IGHV3-42-201ENST00000520410 361 ntBASIC17.47■□□□□ 0.39
EPHB3P54753 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.47■□□□□ 0.39
EPHB3P54753 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.47■□□□□ 0.39
EPHB3P54753 MIR4745-201ENST00000577608 62 ntBASIC17.47■□□□□ 0.39
EPHB3P54753 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.47■□□□□ 0.39
EPHB3P54753 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 AL133373.2-201ENST00000623187 2828 ntBASIC17.47■□□□□ 0.39
EPHB3P54753 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EPHB3P54753 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EPHB3P54753 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.47■□□□□ 0.39
EPHB3P54753 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.47■□□□□ 0.39
EPHB3P54753 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EPHB3P54753 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHB3P54753 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EPHB3P54753 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.46■□□□□ 0.39
EPHB3P54753 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EPHB3P54753 FO538757.1-201ENST00000623083 1397 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms