Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX2-5P52952 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-5P52952 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX2-5P52952 AL031432.3-201ENST00000607698 485 ntBASIC14.33□□□□□ -0.12
NKX2-5P52952 AL139327.4-201ENST00000612362 153 ntBASIC14.33□□□□□ -0.12
NKX2-5P52952 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-5P52952 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX2-5P52952 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-5P52952 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-5P52952 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX2-5P52952 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-5P52952 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-5P52952 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-5P52952 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-5P52952 AC099521.3-201ENST00000624251 2938 ntBASIC14.32□□□□□ -0.12
NKX2-5P52952 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-5P52952 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 REXO1L2P-201ENST00000425429 2069 ntBASIC14.32□□□□□ -0.12
NKX2-5P52952 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-5P52952 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-5P52952 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-5P52952 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-5P52952 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-5P52952 AC112504.1-201ENST00000623415 1841 ntBASIC14.31□□□□□ -0.12
NKX2-5P52952 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 AL390755.1-201ENST00000623716 2027 ntBASIC14.31□□□□□ -0.12
NKX2-5P52952 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NKX2-5P52952 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-5P52952 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-5P52952 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-5P52952 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-5P52952 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms