Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HDGFP51858 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HDGFP51858 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.54■■□□□ 1.36
HDGFP51858 WASH4P-201ENST00000564273 1246 ntBASIC23.54■■□□□ 1.36
HDGFP51858 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC23.54■■□□□ 1.36
HDGFP51858 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.54■■□□□ 1.36
HDGFP51858 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HDGFP51858 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HDGFP51858 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC23.54■■□□□ 1.36
HDGFP51858 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HDGFP51858 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC23.53■■□□□ 1.36
HDGFP51858 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC23.53■■□□□ 1.36
HDGFP51858 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC23.53■■□□□ 1.36
HDGFP51858 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.53■■□□□ 1.36
HDGFP51858 MYCLP2-201ENST00000449268 967 ntBASIC23.53■■□□□ 1.36
HDGFP51858 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 RN7SL837P-201ENST00000463010 287 ntBASIC23.53■■□□□ 1.36
HDGFP51858 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
HDGFP51858 TPRX2P-201ENST00000535362 881 ntBASIC23.53■■□□□ 1.36
HDGFP51858 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
HDGFP51858 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.53■■□□□ 1.36
HDGFP51858 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.53■■□□□ 1.36
HDGFP51858 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.53■■□□□ 1.36
HDGFP51858 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC23.53■■□□□ 1.36
HDGFP51858 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
HDGFP51858 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HDGFP51858 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
HDGFP51858 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC23.52■■□□□ 1.36
HDGFP51858 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
HDGFP51858 RPL28-204ENST00000431533 590 ntTSL 2 BASIC23.52■■□□□ 1.36
HDGFP51858 TTTY23B-201ENST00000442790 549 ntBASIC23.52■■□□□ 1.36
HDGFP51858 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
HDGFP51858 RPL28-206ENST00000558752 671 ntTSL 3 BASIC23.52■■□□□ 1.36
HDGFP51858 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.52■■□□□ 1.36
HDGFP51858 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC23.52■■□□□ 1.36
HDGFP51858 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC23.52■■□□□ 1.36
HDGFP51858 AC004790.1-201ENST00000612686 536 ntBASIC23.52■■□□□ 1.36
HDGFP51858 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
HDGFP51858 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC23.52■■□□□ 1.36
HDGFP51858 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.52■■□□□ 1.36
HDGFP51858 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
HDGFP51858 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
HDGFP51858 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC23.51■■□□□ 1.35
HDGFP51858 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.51■■□□□ 1.35
HDGFP51858 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC23.51■■□□□ 1.35
HDGFP51858 MIR6069-201ENST00000620069 79 ntBASIC23.51■■□□□ 1.35
HDGFP51858 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.51■■□□□ 1.35
HDGFP51858 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.51■■□□□ 1.35
HDGFP51858 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HDGFP51858 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
HDGFP51858 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.51■■□□□ 1.35
HDGFP51858 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
HDGFP51858 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC23.51■■□□□ 1.35
HDGFP51858 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC23.51■■□□□ 1.35
HDGFP51858 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC23.5■■□□□ 1.35
HDGFP51858 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HDGFP51858 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC23.5■■□□□ 1.35
HDGFP51858 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC23.5■■□□□ 1.35
HDGFP51858 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HDGFP51858 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HDGFP51858 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HDGFP51858 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.5■■□□□ 1.35
HDGFP51858 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.5■■□□□ 1.35
HDGFP51858 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.5■■□□□ 1.35
HDGFP51858 AC004408.2-201ENST00000623613 2777 ntBASIC23.5■■□□□ 1.35
HDGFP51858 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HDGFP51858 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HDGFP51858 AL354751.1-201ENST00000412768 1863 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms