Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.38□□□□□ -0.59
PCP4P48539 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.38□□□□□ -0.59
PCP4P48539 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.38□□□□□ -0.59
PCP4P48539 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.38□□□□□ -0.59
PCP4P48539 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PCP4P48539 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 FUT6-201ENST00000286955 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC11.38□□□□□ -0.59
PCP4P48539 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.38□□□□□ -0.59
PCP4P48539 AL109954.1-202ENST00000564051 2148 ntBASIC11.38□□□□□ -0.59
PCP4P48539 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC11.38□□□□□ -0.59
PCP4P48539 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PCP4P48539 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PCP4P48539 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PCP4P48539 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 AC110285.7-201ENST00000624417 1536 ntBASIC11.37□□□□□ -0.59
PCP4P48539 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PCP4P48539 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PCP4P48539 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PCP4P48539 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
PCP4P48539 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.37□□□□□ -0.59
PCP4P48539 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.37□□□□□ -0.59
PCP4P48539 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PCP4P48539 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms