Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
GDNFP39905 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GDNFP39905 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GDNFP39905 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDNFP39905 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDNFP39905 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.71□□□□□ -0.06
GDNFP39905 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GDNFP39905 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
GDNFP39905 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
GDNFP39905 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
GDNFP39905 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.7□□□□□ -0.06
GDNFP39905 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 AC006538.1-201ENST00000567905 1585 ntBASIC14.7□□□□□ -0.06
GDNFP39905 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.7□□□□□ -0.06
GDNFP39905 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 MTCL1P1-201ENST00000446207 792 ntBASIC14.7□□□□□ -0.06
GDNFP39905 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.7□□□□□ -0.06
GDNFP39905 AL445228.2-201ENST00000605589 952 ntBASIC14.7□□□□□ -0.06
GDNFP39905 AC010331.1-201ENST00000611423 582 ntBASIC14.7□□□□□ -0.06
GDNFP39905 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GDNFP39905 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.7□□□□□ -0.06
GDNFP39905 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDNFP39905 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.69□□□□□ -0.06
GDNFP39905 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.69□□□□□ -0.06
GDNFP39905 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
GDNFP39905 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.69□□□□□ -0.06
GDNFP39905 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.69□□□□□ -0.06
GDNFP39905 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GDNFP39905 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GDNFP39905 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 MIR1224-201ENST00000408193 85 ntBASIC14.69□□□□□ -0.06
GDNFP39905 PCED1CP-201ENST00000419887 785 ntBASIC14.69□□□□□ -0.06
GDNFP39905 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 AP002490.2-201ENST00000524791 560 ntBASIC14.69□□□□□ -0.06
GDNFP39905 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.69□□□□□ -0.06
GDNFP39905 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.69□□□□□ -0.06
GDNFP39905 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GDNFP39905 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.69□□□□□ -0.06
GDNFP39905 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms