Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 SIGLEC16-201ENST00000599858 1437 ntBASIC16.06■□□□□ 0.16
KRT20P35900 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT20P35900 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.06■□□□□ 0.16
KRT20P35900 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
KRT20P35900 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT20P35900 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT20P35900 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT20P35900 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.05■□□□□ 0.16
KRT20P35900 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
KRT20P35900 FAAHP1-202ENST00000446499 1238 ntBASIC16.05■□□□□ 0.16
KRT20P35900 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT20P35900 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT20P35900 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT20P35900 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.05■□□□□ 0.16
KRT20P35900 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KRT20P35900 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KRT20P35900 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT20P35900 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT20P35900 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 AL596257.1-201ENST00000641463 2694 ntBASIC16.04■□□□□ 0.16
KRT20P35900 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
KRT20P35900 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT20P35900 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT20P35900 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms