Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 HLA-A-201ENST00000376802 1334 ntBASIC15.48■□□□□ 0.07
THBS1P07996 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
THBS1P07996 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 AL353732.1-201ENST00000569618 1459 ntBASIC15.48■□□□□ 0.07
THBS1P07996 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 AC073621.1-201ENST00000392730 636 ntBASIC15.48■□□□□ 0.07
THBS1P07996 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 KRT8P39-201ENST00000396270 1433 ntBASIC15.48■□□□□ 0.07
THBS1P07996 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THBS1P07996 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
THBS1P07996 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THBS1P07996 GGT3P-204ENST00000453783 1664 ntBASIC15.48■□□□□ 0.07
THBS1P07996 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.47■□□□□ 0.07
THBS1P07996 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
THBS1P07996 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 AC129492.6-201ENST00000611383 1305 ntBASIC15.47■□□□□ 0.07
THBS1P07996 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
THBS1P07996 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.47■□□□□ 0.07
THBS1P07996 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 AL022342.1-201ENST00000400363 863 ntBASIC15.47■□□□□ 0.07
THBS1P07996 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
THBS1P07996 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.47■□□□□ 0.07
THBS1P07996 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
THBS1P07996 RPS2P1-201ENST00000434010 821 ntBASIC15.47■□□□□ 0.07
THBS1P07996 RNA5SP419-201ENST00000515908 135 ntBASIC15.47■□□□□ 0.07
THBS1P07996 AC107918.2-201ENST00000530817 355 ntBASIC15.47■□□□□ 0.07
THBS1P07996 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.47■□□□□ 0.07
THBS1P07996 AC005412.3-201ENST00000580309 715 ntBASIC15.47■□□□□ 0.07
THBS1P07996 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
THBS1P07996 AC008667.4-201ENST00000607370 168 ntBASIC15.47■□□□□ 0.07
THBS1P07996 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
THBS1P07996 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
THBS1P07996 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.47■□□□□ 0.07
THBS1P07996 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
THBS1P07996 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
THBS1P07996 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
THBS1P07996 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
THBS1P07996 ALOX12P2-203ENST00000570921 1945 ntBASIC15.47■□□□□ 0.07
THBS1P07996 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
THBS1P07996 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.46■□□□□ 0.07
THBS1P07996 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
THBS1P07996 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
THBS1P07996 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
THBS1P07996 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
THBS1P07996 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.46■□□□□ 0.07
THBS1P07996 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms