Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KRT6AP02538 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT6AP02538 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT6AP02538 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT6AP02538 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT6AP02538 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT6AP02538 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT6AP02538 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.34■□□□□ 0.21
KRT6AP02538 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
KRT6AP02538 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT6AP02538 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT6AP02538 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT6AP02538 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6AP02538 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6AP02538 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.21
KRT6AP02538 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6AP02538 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
KRT6AP02538 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6AP02538 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT6AP02538 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6AP02538 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
KRT6AP02538 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 AC091304.2-201ENST00000564639 760 ntBASIC16.33■□□□□ 0.2
KRT6AP02538 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 LINC01711-201ENST00000598340 967 ntBASIC16.33■□□□□ 0.2
KRT6AP02538 AC008608.2-201ENST00000606089 416 ntBASIC16.33■□□□□ 0.2
KRT6AP02538 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6AP02538 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT6AP02538 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KRT6AP02538 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KRT6AP02538 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
KRT6AP02538 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT6AP02538 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT6AP02538 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6AP02538 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
KRT6AP02538 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6AP02538 TSPY19P-201ENST00000418461 509 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6AP02538 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6AP02538 TSPY18P-201ENST00000441642 509 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT6AP02538 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6AP02538 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms