Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
IFNA1P01562 AL596087.1-201ENST00000400979 1969 ntBASIC13.36□□□□□ -0.27
IFNA1P01562 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.36□□□□□ -0.27
IFNA1P01562 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.36□□□□□ -0.27
IFNA1P01562 IGHV3-52-201ENST00000519770 353 ntBASIC13.36□□□□□ -0.27
IFNA1P01562 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 AP003097.1-201ENST00000530657 1135 ntBASIC13.36□□□□□ -0.27
IFNA1P01562 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
IFNA1P01562 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
IFNA1P01562 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.36□□□□□ -0.27
IFNA1P01562 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 AC073347.1-201ENST00000421633 2643 ntBASIC13.35□□□□□ -0.27
IFNA1P01562 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.35□□□□□ -0.27
IFNA1P01562 AL603832.2-201ENST00000566195 2125 ntBASIC13.35□□□□□ -0.27
IFNA1P01562 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 AC008403.3-201ENST00000598924 454 ntBASIC13.35□□□□□ -0.27
IFNA1P01562 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.35□□□□□ -0.27
IFNA1P01562 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
IFNA1P01562 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.35□□□□□ -0.27
IFNA1P01562 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 AP002414.2-201ENST00000591780 3365 ntBASIC13.35□□□□□ -0.27
IFNA1P01562 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IFNA1P01562 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.35□□□□□ -0.27
IFNA1P01562 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms