Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 KRT18P2-201ENST00000447938 1258 ntBASIC14.97□□□□□ -0.01
CNOT4O95628 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.97□□□□□ -0.01
CNOT4O95628 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.97□□□□□ -0.01
CNOT4O95628 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.97□□□□□ -0.01
CNOT4O95628 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.97□□□□□ -0.01
CNOT4O95628 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 AC010507.1-201ENST00000633895 436 ntBASIC14.97□□□□□ -0.01
CNOT4O95628 AL645728.2-201ENST00000641974 660 ntBASIC14.97□□□□□ -0.01
CNOT4O95628 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CNOT4O95628 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 TOP3BP1-201ENST00000420768 1380 ntBASIC14.97□□□□□ -0.01
CNOT4O95628 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CNOT4O95628 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.96□□□□□ -0.01
CNOT4O95628 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.96□□□□□ -0.01
CNOT4O95628 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 AC009053.2-201ENST00000563701 2365 ntBASIC14.96□□□□□ -0.01
CNOT4O95628 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.96□□□□□ -0.01
CNOT4O95628 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CNOT4O95628 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.96□□□□□ -0.01
CNOT4O95628 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.96□□□□□ -0.01
CNOT4O95628 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CNOT4O95628 AC091167.2-201ENST00000579581 588 ntBASIC14.96□□□□□ -0.01
CNOT4O95628 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.96□□□□□ -0.01
CNOT4O95628 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CNOT4O95628 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNOT4O95628 FRMD8P1-201ENST00000440433 1524 ntBASIC14.96□□□□□ -0.02
CNOT4O95628 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.96□□□□□ -0.02
CNOT4O95628 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
CNOT4O95628 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT4O95628 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CNOT4O95628 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.96□□□□□ -0.02
CNOT4O95628 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CNOT4O95628 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CNOT4O95628 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 TUBB8P12-201ENST00000308911 1335 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 TUBB7P-202ENST00000428444 1305 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 TUBB8P7-204ENST00000567960 1332 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.95□□□□□ -0.02
CNOT4O95628 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CNOT4O95628 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CNOT4O95628 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 AC107918.2-201ENST00000530817 355 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.95□□□□□ -0.02
CNOT4O95628 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 PDPK2P-202ENST00000562415 1191 ntBASIC14.95□□□□□ -0.02
CNOT4O95628 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CNOT4O95628 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.95□□□□□ -0.02
CNOT4O95628 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms