Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMPCBO75439 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PMPCBO75439 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.11■□□□□ 0.33
PMPCBO75439 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.11■□□□□ 0.33
PMPCBO75439 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PMPCBO75439 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMPCBO75439 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMPCBO75439 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMPCBO75439 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMPCBO75439 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
PMPCBO75439 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PMPCBO75439 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PMPCBO75439 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PMPCBO75439 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.1■□□□□ 0.33
PMPCBO75439 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 AC108751.1-201ENST00000490852 363 ntBASIC17.1■□□□□ 0.33
PMPCBO75439 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PMPCBO75439 AC107918.2-201ENST00000530817 355 ntBASIC17.1■□□□□ 0.33
PMPCBO75439 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.1■□□□□ 0.33
PMPCBO75439 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMPCBO75439 LINC00895-201ENST00000629028 1637 ntBASIC17.1■□□□□ 0.33
PMPCBO75439 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.1■□□□□ 0.33
PMPCBO75439 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PMPCBO75439 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
PMPCBO75439 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PMPCBO75439 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.09■□□□□ 0.33
PMPCBO75439 RNA5SP415-201ENST00000517246 115 ntBASIC17.09■□□□□ 0.33
PMPCBO75439 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.09■□□□□ 0.33
PMPCBO75439 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 UNC93B6-202ENST00000528242 690 ntBASIC17.09■□□□□ 0.33
PMPCBO75439 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 MIR4751-201ENST00000578027 74 ntBASIC17.09■□□□□ 0.33
PMPCBO75439 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 AC006277.1-201ENST00000624348 1610 ntBASIC17.09■□□□□ 0.33
PMPCBO75439 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.09■□□□□ 0.33
PMPCBO75439 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.09■□□□□ 0.33
PMPCBO75439 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMPCBO75439 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PMPCBO75439 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMPCBO75439 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PMPCBO75439 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMPCBO75439 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PMPCBO75439 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMPCBO75439 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMPCBO75439 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.08■□□□□ 0.33
PMPCBO75439 HLA-A-202ENST00000376806 1854 ntBASIC17.08■□□□□ 0.33
PMPCBO75439 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMPCBO75439 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMPCBO75439 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PMPCBO75439 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms