Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 GPR89P-201ENST00000407924 1495 ntBASIC16.25■□□□□ 0.19
SLC28A2O43868 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC28A2O43868 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC28A2O43868 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 BX005266.1-201ENST00000473402 457 ntBASIC16.25■□□□□ 0.19
SLC28A2O43868 AC136632.2-201ENST00000512891 861 ntBASIC16.25■□□□□ 0.19
SLC28A2O43868 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC28A2O43868 AC093525.9-201ENST00000624961 1746 ntBASIC16.25■□□□□ 0.19
SLC28A2O43868 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC28A2O43868 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC28A2O43868 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SLC28A2O43868 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC28A2O43868 AC046185.3-201ENST00000623228 1824 ntBASIC16.24■□□□□ 0.19
SLC28A2O43868 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC28A2O43868 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC28A2O43868 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 AL139400.1-201ENST00000366220 510 ntBASIC16.24■□□□□ 0.19
SLC28A2O43868 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC28A2O43868 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC28A2O43868 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC28A2O43868 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC28A2O43868 AC122714.2-201ENST00000502787 707 ntBASIC16.24■□□□□ 0.19
SLC28A2O43868 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC28A2O43868 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC28A2O43868 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC28A2O43868 MIR4751-201ENST00000578027 74 ntBASIC16.24■□□□□ 0.19
SLC28A2O43868 AC005498.2-205ENST00000593218 784 ntBASIC16.24■□□□□ 0.19
SLC28A2O43868 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
SLC28A2O43868 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC28A2O43868 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC28A2O43868 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC28A2O43868 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC28A2O43868 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC28A2O43868 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC28A2O43868 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC28A2O43868 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC28A2O43868 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC28A2O43868 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms