Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF113AO15541 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF113AO15541 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF113AO15541 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.12■□□□□ 0.81
RNF113AO15541 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF113AO15541 MKNK2P1-201ENST00000437526 628 ntBASIC20.12■□□□□ 0.81
RNF113AO15541 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.12■□□□□ 0.81
RNF113AO15541 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF113AO15541 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF113AO15541 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF113AO15541 AC005829.1-201ENST00000570002 483 ntBASIC20.12■□□□□ 0.81
RNF113AO15541 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF113AO15541 AC099522.2-201ENST00000607001 744 ntBASIC20.12■□□□□ 0.81
RNF113AO15541 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RNF113AO15541 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF113AO15541 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RNF113AO15541 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF113AO15541 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RNF113AO15541 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF113AO15541 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF113AO15541 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF113AO15541 KRT18P13-201ENST00000400056 1290 ntBASIC20.11■□□□□ 0.81
RNF113AO15541 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF113AO15541 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RNF113AO15541 MIR3687-2-201ENST00000577708 61 ntBASIC20.11■□□□□ 0.81
RNF113AO15541 MIR3687-1-201ENST00000614492 61 ntBASIC20.11■□□□□ 0.81
RNF113AO15541 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF113AO15541 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF113AO15541 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF113AO15541 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF113AO15541 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF113AO15541 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF113AO15541 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF113AO15541 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF113AO15541 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF113AO15541 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
RNF113AO15541 AC021097.1-201ENST00000607902 574 ntBASIC20.1■□□□□ 0.81
RNF113AO15541 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF113AO15541 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF113AO15541 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RNF113AO15541 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF113AO15541 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 UBALD1-205ENST00000590891 2641 ntBASIC20.1■□□□□ 0.81
RNF113AO15541 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF113AO15541 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF113AO15541 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF113AO15541 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
RNF113AO15541 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF113AO15541 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF113AO15541 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF113AO15541 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms