Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A1O14983 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP2A1O14983 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A1O14983 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2A1O14983 AL035633.1-201ENST00000406139 838 ntBASIC19.18■□□□□ 0.66
ATP2A1O14983 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.18■□□□□ 0.66
ATP2A1O14983 BASP1P1-201ENST00000430708 665 ntBASIC19.18■□□□□ 0.66
ATP2A1O14983 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A1O14983 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2A1O14983 AC093214.1-201ENST00000511688 1107 ntBASIC19.18■□□□□ 0.66
ATP2A1O14983 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2A1O14983 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A1O14983 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A1O14983 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATP2A1O14983 PCDHB18P-201ENST00000524813 2368 ntBASIC19.17■□□□□ 0.66
ATP2A1O14983 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP2A1O14983 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.17■□□□□ 0.66
ATP2A1O14983 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A1O14983 AC105233.2-201ENST00000523697 349 ntBASIC19.17■□□□□ 0.66
ATP2A1O14983 AF228730.5-201ENST00000530288 346 ntBASIC19.17■□□□□ 0.66
ATP2A1O14983 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP2A1O14983 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP2A1O14983 MIR4745-201ENST00000577608 62 ntBASIC19.17■□□□□ 0.66
ATP2A1O14983 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A1O14983 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.17■□□□□ 0.66
ATP2A1O14983 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2A1O14983 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A1O14983 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 AC068880.1-201ENST00000507289 2297 ntBASIC19.17■□□□□ 0.66
ATP2A1O14983 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2A1O14983 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ATP2A1O14983 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2A1O14983 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ATP2A1O14983 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A1O14983 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2A1O14983 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2A1O14983 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 KRT18P34-201ENST00000488218 1270 ntBASIC19.16■□□□□ 0.66
ATP2A1O14983 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A1O14983 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A1O14983 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.16■□□□□ 0.66
ATP2A1O14983 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A1O14983 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A1O14983 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A1O14983 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A1O14983 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A1O14983 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A1O14983 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 INGX-202ENST00000489074 768 ntBASIC19.15■□□□□ 0.66
ATP2A1O14983 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.15■□□□□ 0.66
ATP2A1O14983 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2A1O14983 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2A1O14983 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms